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The Molecular Ecological Network Analyses Pipeline (MENAP)

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The MENAP is used to model, analyze and manage the Molecular Ecological Networks (MENs) from metagenomic datasets, e.g. GeoChip and pyrosequencing. Please cite Deng et al, BMC bioinformatics, 2012, Zhou, Deng et al, mBio, 2010, Zhou, Deng et al, mBio 2011, and Xiao et al, PNAS, 2022 as references.

Maintainer: Naijia Xiao (

Programer: Ye Deng (

Start date: June 2010

Summary: total 7056 users have uploaded 109543 datasets and construct to 104345 networks so far.